Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs78797820 chr21:44254185 C/T 0.000171 286 25.53 43.53 13.07 KM Plot
KIRP rs78813580 chr16:980132 G/C 6.13E-5 282 27.13 25.57 14.83 KM Plot
KIRP rs78824534 chr22:21215355 C/G 5.56E-7 289 24.3 34.98 17.48 KM Plot
KIRP rs78854654 chr10:43546708 T/G 2.85E-5 284 25.63 26.05 11.43 KM Plot
KIRP rs78869689 chr2:47135904 G/T 2.19E-7 289 25.37 34.43 10.97 KM Plot
KIRP rs78901932 chr10:43511323 A/C 2.84E-6 285 25.63 26.52 16.12 KM Plot
KIRP rs7895943 chr10:88279721 C/T 6.33E-8 284 26.37 23.1 9.77 KM Plot
KIRP rs7899879 chr10:43376624 G/A 7.79E-5 286 25.62 26.63 11.43 KM Plot
KIRP rs79044335 chr11:47200402 G/C 4.98E-6 288 25.57 29.8 12.63 KM Plot
KIRP rs79070252 chr10:43381830 G/A 7.98E-5 285 25.62 26.52 11.43 KM Plot
KIRP rs79072756 chr21:44233055 A/C 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs7908318 chr10:43190640 C/T 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs79097783 chr21:44229777 T/G 0.000162 286 25.53 43.53 13.07 KM Plot
KIRP rs79109922 chr18:75524471 T/C 3.08E-5 281 26 22.37 3.73 KM Plot
KIRP rs7912320 chr10:88272432 T/G 6.33E-8 284 26.37 23.1 9.77 KM Plot